Class b: All beta proteins [48724] (180 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) |
Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins) the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2 there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus) |
Protein Human enterovirus B coat proteins [88635] (4 species) |
Human coxsackievirus A9 [TaxId:12067] [49683] (1 PDB entry) |
Domain d1d4m.1: 1d4m 4:,2: [83046] complexed with myr, w71 |
Domain d1d4m1_: 1d4m 1: [23567] complexed with myr, w71 |
Domain d1d4m3_: 1d4m 3: [23569] complexed with myr, w71 |
Human coxsackievirus B3 [TaxId:12072] [49681] (2 PDB entries) |
Domain d1cov.1: 1cov 4:,2: [83045] complexed with myr, plm |
Domain d1cov1_: 1cov 1: [23564] complexed with myr, plm |
Domain d1cov3_: 1cov 3: [23566] complexed with myr, plm |
Domain d4gb33_: 4gb3 3: [194629] Other proteins in same PDB: d4gb31_ automated match to d1cov3_ complexed with myr, plm |
Human echovirus 1 [TaxId:46633] [49685] (1 PDB entry) |
Domain d1ev1.1: 1ev1 4:,2: [83050] complexed with myr, plm |
Domain d1ev11_: 1ev1 1: [23570] complexed with myr, plm |
Domain d1ev13_: 1ev1 3: [23572] complexed with myr, plm |
Human echovirus 11 [TaxId:12078] [74890] (3 PDB entries) |
Domain d1h8t.1: 1h8t D:,B: [83061] complexed with doa, myr |
Domain d1h8ta_: 1h8t A: [70920] complexed with doa, myr |
Domain d1h8tc_: 1h8t C: [70922] complexed with doa, myr |
Domain d1upn.1: 1upn D:,B: [99761] Other proteins in same PDB: d1upne1, d1upne2 |
Domain d1upna_: 1upn A: [99762] Other proteins in same PDB: d1upne1, d1upne2 |
Domain d1upnc_: 1upn C: [99763] Other proteins in same PDB: d1upne1, d1upne2 |
Timeline for Protein Human enterovirus B coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4):