Lineage for Species: Human (Homo sapiens), cluster 5

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 547970Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 548047Species Human (Homo sapiens), cluster 5 [TaxId:9606] [88540] (4 PDB entries)

PDB entries in Species: Human (Homo sapiens), cluster 5:

  1. Domain(s) for 1adq:
  2. Domain(s) for 1lil:
    1. 548052Domain d1lila1: 1lil A:2-107 [20557]
      Other proteins in same PDB: d1lila2, d1lilb2
    2. 548053Domain d1lilb1: 1lil B:2-107 [20558]
      Other proteins in same PDB: d1lila2, d1lilb2
      part of Bence-Jones protein CLE
  3. Domain(s) for 1w72:
    1. 548050Domain d1w72l1: 1w72 L:1-107 [114303]
      Other proteins in same PDB: d1w72a1, d1w72a2, d1w72b_, d1w72d1, d1w72d2, d1w72e_, d1w72h1, d1w72h2, d1w72i1, d1w72i2, d1w72l2, d1w72m2
    2. 548051Domain d1w72m1: 1w72 M:1-107 [114305]
      Other proteins in same PDB: d1w72a1, d1w72a2, d1w72b_, d1w72d1, d1w72d2, d1w72e_, d1w72h1, d1w72h2, d1w72i1, d1w72i2, d1w72l2, d1w72m2
      complexed with gol
  4. Domain(s) for 8fab:
    1. 548048Domain d8faba1: 8fab A:3-105 [19772]
      Other proteins in same PDB: d8faba2, d8fabb1, d8fabb2, d8fabc2, d8fabd1, d8fabd2
    2. 548049Domain d8fabc1: 8fab C:3-105 [19774]
      Other proteins in same PDB: d8faba2, d8fabb1, d8fabb2, d8fabc2, d8fabd1, d8fabd2
      part of Fab HIL

More info for Species Human (Homo sapiens), cluster 5 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda

Timeline for Species Human (Homo sapiens), cluster 5 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda: