Lineage for Species: Mouse (Mus musculus), cluster 3.2

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 452004Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88528] (19 PDB entries)

PDB entries in Species: Mouse (Mus musculus), cluster 3.2:

  1. Domain(s) for 1ay1:
  2. Domain(s) for 1baf:
  3. Domain(s) for 1bgx:
  4. Domain(s) for 1bql:
  5. Domain(s) for 1dqd:
  6. Domain(s) for 1eo8:
  7. Domain(s) for 1for:
  8. Domain(s) for 1mim:
  9. Domain(s) for 1ots:
    1. 452018Domain d1otsd1: 1ots D:1-106 [87419]
      Other proteins in same PDB: d1otsa_, d1otsb_, d1otsc1, d1otsc2, d1otsd2, d1otse1, d1otse2, d1otsf2
    2. 452019Domain d1otsf1: 1ots F:1-106 [87423]
      Other proteins in same PDB: d1otsa_, d1otsb_, d1otsc1, d1otsc2, d1otsd2, d1otse1, d1otse2, d1otsf2
      part of anti-CLC chloride channel Fab
  10. Domain(s) for 1ott:
    1. 452027Domain d1ottd1: 1ott D:1-106 [87429]
      Other proteins in same PDB: d1otta_, d1ottb_, d1ottc1, d1ottc2, d1ottd2, d1otte1, d1otte2, d1ottf2
    2. 452028Domain d1ottf1: 1ott F:1-106 [87433]
      Other proteins in same PDB: d1otta_, d1ottb_, d1ottc1, d1ottc2, d1ottd2, d1otte1, d1otte2, d1ottf2
      part of anti-CLC chloride channel Fab
  11. Domain(s) for 1otu:
    1. 452025Domain d1otud1: 1otu D:1-106 [87439]
      Other proteins in same PDB: d1otua_, d1otub_, d1otuc1, d1otuc2, d1otud2, d1otue1, d1otue2, d1otuf2
    2. 452026Domain d1otuf1: 1otu F:1-106 [87443]
      Other proteins in same PDB: d1otua_, d1otub_, d1otuc1, d1otuc2, d1otud2, d1otue1, d1otue2, d1otuf2
      part of anti-CLC chloride channel Fab
  12. Domain(s) for 1psk:
  13. Domain(s) for 1qok:
  14. Domain(s) for 1rvf:
  15. Domain(s) for 1sy6:
  16. Domain(s) for 1v7m:
    1. 452016Domain d1v7ml1: 1v7m L:1-107 [100454]
      Other proteins in same PDB: d1v7mh1, d1v7mh2, d1v7mi1, d1v7mi2, d1v7ml2, d1v7mm2, d1v7mv_, d1v7mx_
    2. 452017Domain d1v7mm1: 1v7m M:1-107 [100456]
      Other proteins in same PDB: d1v7mh1, d1v7mh2, d1v7mi1, d1v7mi2, d1v7ml2, d1v7mm2, d1v7mv_, d1v7mx_
      part of anti-trombopoetin Fab tn1
  17. Domain(s) for 1v7n:
    1. 452021Domain d1v7nl1: 1v7n L:1-107 [100468]
      Other proteins in same PDB: d1v7nh1, d1v7nh2, d1v7ni1, d1v7ni2, d1v7nj1, d1v7nj2, d1v7nk1, d1v7nk2, d1v7nl2, d1v7nm2, d1v7nn2, d1v7no2, d1v7nv_, d1v7nx_, d1v7ny_, d1v7nz_
    2. 452022Domain d1v7nm1: 1v7n M:1-107 [100470]
      Other proteins in same PDB: d1v7nh1, d1v7nh2, d1v7ni1, d1v7ni2, d1v7nj1, d1v7nj2, d1v7nk1, d1v7nk2, d1v7nl2, d1v7nm2, d1v7nn2, d1v7no2, d1v7nv_, d1v7nx_, d1v7ny_, d1v7nz_
    3. 452023Domain d1v7nn1: 1v7n N:1-107 [100472]
      Other proteins in same PDB: d1v7nh1, d1v7nh2, d1v7ni1, d1v7ni2, d1v7nj1, d1v7nj2, d1v7nk1, d1v7nk2, d1v7nl2, d1v7nm2, d1v7nn2, d1v7no2, d1v7nv_, d1v7nx_, d1v7ny_, d1v7nz_
    4. 452024Domain d1v7no1: 1v7n O:1-107 [100474]
      Other proteins in same PDB: d1v7nh1, d1v7nh2, d1v7ni1, d1v7ni2, d1v7nj1, d1v7nj2, d1v7nk1, d1v7nk2, d1v7nl2, d1v7nm2, d1v7nn2, d1v7no2, d1v7nv_, d1v7nx_, d1v7ny_, d1v7nz_
      part of anti-trombopoetin Fab tn1
  18. Domain(s) for 2iff:
  19. Domain(s) for 3hfl:

More info for Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa

Timeline for Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa: