![]() | Class b: All beta proteins [48724] (144 folds) |
![]() | Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies) sandwich; 7 strands in 2 sheets; greek-key some members of the fold have additional strands |
![]() | Superfamily b.1.1: Immunoglobulin [48726] (4 families) ![]() |
![]() | Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins) |
![]() | Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species) VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species |
![]() | Species Mouse (Mus musculus), cluster 2 [TaxId:10090] [88526] (24 PDB entries) |
![]() | Domain d1acyl1: 1acy L:1-108 [19884] Other proteins in same PDB: d1acyh1, d1acyh2, d1acyl2 part of Fab 59.1 |
![]() | Domain d1afvl1: 1afv L:1-112 [20130] Other proteins in same PDB: d1afva_, d1afvb_, d1afvh1, d1afvh2, d1afvk1, d1afvk2, d1afvl2, d1afvm2 |
![]() | Domain d1afvm1: 1afv M:1-112 [20132] Other proteins in same PDB: d1afva_, d1afvb_, d1afvh1, d1afvh2, d1afvk1, d1afvk2, d1afvl2, d1afvm2 part of Fab 25.3 against HIV-1 capsid protein (p24) |
![]() | Domain d1ai1l1: 1ai1 L:1-108 [19882] Other proteins in same PDB: d1ai1h1, d1ai1h2, d1ai1l2 part of Fab 59.1 |
![]() | Domain d1egjl1: 1egj L:1-107 [20500] Other proteins in same PDB: d1egja_, d1egjh1, d1egjh2, d1egjl2 part of Fab 13B5 against cytokine receptor common beta chain domain 4 |
![]() | Domain d1ejol1: 1ejo L:2001-2111 [20428] Other proteins in same PDB: d1ejoh1, d1ejoh2, d1ejol2 part of anti-FMDV Fab 4C4 |
![]() | Domain d1f58l1: 1f58 L:1-107 [20350] Other proteins in same PDB: d1f58h1, d1f58h2, d1f58l2 part of anti-gp120 (HIV-1) Fab 58.2 |
![]() | Domain d1ggbl1: 1ggb L:1-107 [19874] Other proteins in same PDB: d1ggbh1, d1ggbh2, d1ggbl2 part of Fab 50.1 |
![]() | Domain d1ggcl1: 1ggc L:1-107 [19880] Other proteins in same PDB: d1ggch1, d1ggch2, d1ggcl2 part of Fab 50.1 |
![]() | Domain d1h0da1: 1h0d A:1-106 [83425] Other proteins in same PDB: d1h0da2, d1h0db1, d1h0db2, d1h0dc_ part of anti-angiogenin FAB; conflict: annotated in PDB as human |
![]() | Domain d1ibgl1: 1ibg L:2-107 [20048] Other proteins in same PDB: d1ibgh1, d1ibgh2, d1ibgl2 part of Fab 40-50 |
![]() | Domain d1iqwl1: 1iqw L:1-111 [66279] Other proteins in same PDB: d1iqwh1, d1iqwh2, d1iqwl2 part of anti-human Fas Fab HFE7a |
![]() | Domain d1j05a_: 1j05 A: [90735] Other proteins in same PDB: d1j05b_, d1j05h_ |
![]() | Domain d1j05l_: 1j05 L: [90738] Other proteins in same PDB: d1j05b_, d1j05h_ part of anti-CEA Fv T84.66 |
![]() | Domain d1moea1: 1moe A:1-119 [85030] Other proteins in same PDB: d1moea2, d1moeb2 |
![]() | Domain d1moeb1: 1moe B:1-119 [85032] Other proteins in same PDB: d1moea2, d1moeb2 part of anti-CEA scFv T84.66; VL to VH linkage: includes linker residues 112-119; assembles as a diabody |
![]() | Domain d1nsnl1: 1nsn L:1-107 [20070] Other proteins in same PDB: d1nsnh1, d1nsnh2, d1nsnl2, d1nsns_ part of Fab N10 |
![]() | Domain d1qfwl_: 1qfw L: [20434] Other proteins in same PDB: d1qfwa_, d1qfwb_, d1qfwh_, d1qfwi_ part of anti-[gonadotropin alpha subunit] Fv |
![]() | Domain d1qnzl_: 1qnz L: [20448] Other proteins in same PDB: d1qnzh_ part of anti-HIV Fv 0.5B |
![]() | Domain d2f58l1: 2f58 L:1-107 [20354] Other proteins in same PDB: d2f58h1, d2f58h2, d2f58l2 part of anti-gp120 (HIV-1) Fab 58.2 |
![]() | Domain d32c2a1: 32c2 A:1-110 [20438] Other proteins in same PDB: d32c2a2, d32c2b1, d32c2b2 part of the cytochrome P450-arom activity suppressing Fab 32C2 |
![]() | Domain d3f58l1: 3f58 L:1-107 [20352] Other proteins in same PDB: d3f58h1, d3f58h2, d3f58l2 part of anti-gp120 (HIV-1) Fab 58.2 |
Timeline for Species Mouse (Mus musculus), cluster 2 [TaxId:10090] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa: