Lineage for Species: Human (Homo sapiens), cluster 2 [TaxId: 9606]

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 781542Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 781543Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 781544Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (32 proteins)
  6. 782637Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 782762Species Human (Homo sapiens), cluster 2 [TaxId:9606] [88521] (10 PDB entries)

PDB entries in Species: Human (Homo sapiens), cluster 2 [TaxId: 9606]:

  1. Domain(s) for 1eeq:
    1. 782763Domain d1eeqa_: 1eeq A: [20544]
      VL dimer of Bence-Jones protein LEN
    2. 782764Domain d1eeqb_: 1eeq B: [20545]
      VL dimer of Bence-Jones protein LEN
      mutant
  2. Domain(s) for 1eeu:
    1. 782765Domain d1eeua_: 1eeu A: [20546]
      VL dimer of Bence-Jones protein LEN
    2. 782766Domain d1eeub_: 1eeu B: [20547]
      VL dimer of Bence-Jones protein LEN
      complexed with ipa; mutant
  3. Domain(s) for 1efq:
    • 782769Domain d1efqa_: 1efq A: [20548]
      VL dimer of Bence-Jones protein LEN
      complexed with ium, zn; mutant
  4. Domain(s) for 1ek3:
    1. 782770Domain d1ek3a_: 1ek3 A: [59434]
      VL dimer of Bence-Jones protein REC
    2. 782771Domain d1ek3b_: 1ek3 B: [59435]
      VL dimer of Bence-Jones protein REC
      complexed with ca, cl
  5. Domain(s) for 1lve:
  6. Domain(s) for 1qac:
    1. 782767Domain d1qaca_: 1qac A: [20549]
      VL dimer of Bence-Jones protein LEN
    2. 782768Domain d1qacb_: 1qac B: [20550]
      VL dimer of Bence-Jones protein LEN
  7. Domain(s) for 2lve:
  8. Domain(s) for 3lve:
    • 782773Domain d3lvea_: 3lve A: [20552]
      VL dimer of Bence-Jones protein LEN
      complexed with zn; mutant
  9. Domain(s) for 4lve:
    1. 782775Domain d4lvea_: 4lve A: [20554]
      VL dimer of Bence-Jones protein LEN
    2. 782776Domain d4lveb_: 4lve B: [20555]
      VL dimer of Bence-Jones protein LEN
      mutant
  10. Domain(s) for 5lve:

More info for Species Human (Homo sapiens), cluster 2 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa

Timeline for Species Human (Homo sapiens), cluster 2 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa: