SCOPe 2.08: Protein: Phycoerythrin beta subunit

Lineage for Protein: Phycoerythrin beta subunit

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.1: Globin-like [46457] (2 superfamilies)
core: 6 helices; folded leaf, partly opened
Superfamily a.1.1: Globin-like [46458] (5 families)

Family a.1.1.3: Phycocyanin-like phycobilisome proteins [46532] (7 proteins)
oligomers of two different types of globin-like subunits containing two extra helices at the N-terminus
binds a bilin chromophore
automatically mapped to Pfam PF00502

Protein Phycoerythrin beta subunit [88513] (4 species)

Species:

Cryptophyte (Rhodomonas sp. CS24) [TaxId:79257] [46544] (3 PDB entries)
Uniprot P27198
1. Domains for 1qgw:
  1. Domain d1qgwc_: 1qgw C: [15673]
    Other proteins in same PDB: d1qgwa_, d1qgwb_
    complexed with cl, dbv, mg, peb
  2. Domain d1qgwd_: 1qgw D: [15674]
    Other proteins in same PDB: d1qgwa_, d1qgwb_
    complexed with cl, dbv, mg, peb
2. Domains for 1xf6:
  1. Domain d1xf6c_: 1xf6 C: [115242]
    Other proteins in same PDB: d1xf6a_, d1xf6b_
    complexed with cl, dbv, mg, peb
  2. Domain d1xf6d_: 1xf6 D: [115243]
    Other proteins in same PDB: d1xf6a_, d1xf6b_
    complexed with cl, dbv, mg, peb
3. Domains for 1xg0:
  1. Domain d1xg0c_: 1xg0 C: [115275]
    Other proteins in same PDB: d1xg0a_, d1xg0b_
    complexed with cl, dbv, mg, peb
  2. Domain d1xg0d_: 1xg0 D: [115276]
    Other proteins in same PDB: d1xg0a_, d1xg0b_
    complexed with cl, dbv, mg, peb
Red alga (Griffithsia monilis) [TaxId:42003] [88515] (1 PDB entry)
- Domains for 1b8d:
  1. Domain d1b8db_: 1b8d B: [15666]
    Other proteins in same PDB: d1b8da_, d1b8dk_
    complexed with peb, pub
  2. Domain d1b8dl_: 1b8d L: [15668]
    Other proteins in same PDB: d1b8da_, d1b8dk_
    complexed with peb, pub
Red alga (Polysiphonia urceolata) [TaxId:65404] [88514] (1 PDB entry)
- Domains for 1lia:
  1. Domain d1liab_: 1lia B: [15662]
    Other proteins in same PDB: d1liaa_, d1liak_
    complexed with cyc, pub
  2. Domain d1lial_: 1lia L: [15664]
    Other proteins in same PDB: d1liaa_, d1liak_
    complexed with cyc, pub
Red algae (Gracilaria chilensis) [TaxId:2775] [88516] (1 PDB entry)
- Domains for 1eyx:
  1. Domain d1eyxb_: 1eyx B: [15670]
    Other proteins in same PDB: d1eyxa_, d1eyxk_
    complexed with bla, cyc, pub, so4
  2. Domain d1eyxl_: 1eyx L: [15672]
    Other proteins in same PDB: d1eyxa_, d1eyxk_
    complexed with bla, cyc, pub, so4

More info for Protein Phycoerythrin beta subunit from a.1.1.3: Phycocyanin-like phycobilisome proteins

Timeline for Protein Phycoerythrin beta subunit from a.1.1.3: Phycocyanin-like phycobilisome proteins:

Protein Phycoerythrin beta subunit from a.1.1.3: Phycocyanin-like phycobilisome proteins first appeared in SCOP 1.65
Protein Phycoerythrin beta subunit from a.1.1.3: Phycocyanin-like phycobilisome proteins appears in SCOPe 2.07