Lineage for d2f5al2 (2f5a L:108-213)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 654118Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 655938Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)
  7. 655939Species Human (Homo sapiens) [TaxId:9606] [88569] (125 PDB entries)
    including humanized antibodies (chimeric proteins with human constant domains)
  8. 655981Domain d2f5al2: 2f5a L:108-213 [88505]
    Other proteins in same PDB: d2f5ah1, d2f5ah2, d2f5al1
    part of HIV-1 neutralizing Fab 2F5

Details for d2f5al2

PDB Entry: 2f5a (more details), 2.05 Å

PDB Description: crystal structure of fab' from the hiv-1 neutralizing antibody 2f5
PDB Compounds: (L:) protein (antibody 2f5 (light chain))

SCOP Domain Sequences for d2f5al2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2f5al2 b.1.1.2 (L:108-213) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}

SCOP Domain Coordinates for d2f5al2:

Click to download the PDB-style file with coordinates for d2f5al2.
(The format of our PDB-style files is described here.)

Timeline for d2f5al2:

View in 3D
Domains from same chain:
(mouse over for more information)