Lineage for d2f5al2 (2f5a L:108-213)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 548299Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 549707Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)
  7. 549708Species Human (Homo sapiens) [TaxId:9606] [88569] (100 PDB entries)
    including humanized antibodies (chimeric proteins with human constant domains)
  8. 549741Domain d2f5al2: 2f5a L:108-213 [88505]
    Other proteins in same PDB: d2f5ah1, d2f5ah2, d2f5al1
    part of HIV-1 neutralizing Fab 2F5

Details for d2f5al2

PDB Entry: 2f5a (more details), 2.05 Å

PDB Description: crystal structure of fab' from the hiv-1 neutralizing antibody 2f5

SCOP Domain Sequences for d2f5al2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2f5al2 b.1.1.2 (L:108-213) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens)}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyecevthqglsspvtksfnrge

SCOP Domain Coordinates for d2f5al2:

Click to download the PDB-style file with coordinates for d2f5al2.
(The format of our PDB-style files is described here.)

Timeline for d2f5al2:

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Domains from same chain:
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d2f5al1