Lineage for d1ud5a1 (1ud5 A:391-480)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 302223Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
    folded sheet; greek-key
  4. 302224Superfamily b.71.1: Glycosyl hydrolase domain [51011] (2 families) (S)
  5. 302225Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain [51012] (19 proteins)
    this domain follows the catalytic beta/alpha barrel domain
  6. 302295Protein Bacterial alpha-Amylase [51013] (6 species)
  7. 302309Species Bacillus sp., ksm-k38 [TaxId:1409] [89382] (6 PDB entries)
  8. 302314Domain d1ud5a1: 1ud5 A:391-480 [88475]
    Other proteins in same PDB: d1ud5a2
    complexed with na, rb

Details for d1ud5a1

PDB Entry: 1ud5 (more details), 2.7 Å

PDB Description: Crystal structure of AmyK38 with rubidium ion

SCOP Domain Sequences for d1ud5a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ud5a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38}
yaygtqhdyfdhwdvvgwtregsssrpnsglatimsngpggskwmyvgrqnagqtwtdlt
gnngasvtingdgwgefftnggsvsvyvnq

SCOP Domain Coordinates for d1ud5a1:

Click to download the PDB-style file with coordinates for d1ud5a1.
(The format of our PDB-style files is described here.)

Timeline for d1ud5a1:

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Domains from same chain:
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d1ud5a2