SCOP 1.65: Domain d1ubfa1: 1ubf A:4-270

Lineage for d1ubfa1 (1ubf A:4-270)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (21 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (11 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein RecA protein, ATPase-domain [52671] (3 species)
   C-terminal domain is alpha+beta

7. Species Mycobacterium smegmatis [TaxId:1772] [89675] (4 PDB entries)

8. Domain d1ubfa1: 1ubf A:4-270 [88414]
   Other proteins in same PDB: d1ubfa2
   complexed with sap

Details for d1ubfa1

PDB Entry: 1ubf, 3.5 Å

PDB Description: MsREcA-ATPgS complex

SCOP Domain Sequences for d1ubfa1:

Sequence, based on SEQRES records:

>d1ubfa1 c.37.1.11 (A:4-270) RecA protein, ATPase-domain {Mycobacterium smegmatis}
qapdrekalelamaqidknfgkgsvmrlgeevrqpisviptgsisldvalgigglprgrv
ieiygpessgkttvalhavanaqaaggiaafidaehaldpeyakklgvdtdsllvsqpdt
geqaleiadmlvrsgaldiividsvaalvpraeiegemgdshvglqarlmsqalrkmtga
lnnsgttaifinqlrekigvmfgspetttggkalkfyasvrldvrrietlkdgtdavgnr
trvkvvknkvsppfkqaefdilygqgi

Sequence, based on observed residues (ATOM records):

>d1ubfa1 c.37.1.11 (A:4-270) RecA protein, ATPase-domain {Mycobacterium smegmatis}
qapdrekalelamaqidknfgkgsvmrlgeevrqpisviptgsisldvalgigglprgrv
ieiygpessgkttvalhavanaqaaggiaafidaehaldpeyakklgvdtdsllvsqpdt
geqaleiadmlvrsgaldiividsvaalvpraeiegglqarlmsqalrkmtgalnnsgtt
aifinqlrekitggkalkfyasvrldvrrietlkdgtdavgnrtrvkvvknkvsppfkqa
efdilygqgi

Timeline for d1ubfa1:

• d1ubfa1 is new in SCOP 1.65
  
• d1ubfa1 appears in SCOP 1.67
  
• d1ubfa1 appears in the current release, SCOPe 2.08