Class c: Alpha and beta proteins (a/b) [51349] (121 folds) |
Fold c.116: alpha/beta knot [75216] (1 superfamily) core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot |
Superfamily c.116.1: alpha/beta knot [75217] (5 families) known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily all known members have dimeric structures |
Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD [89629] (1 protein) fold and dimerisation mode are similar to those of the YbeA-like family; contains additional C-terminal all-alpha subdomain |
Protein tRNA(m1G37)-methyltransferase TrmD [89630] (1 species) |
Species Haemophilus influenzae [TaxId:727] [89631] (4 PDB entries) |
Domain d1uaka_: 1uak A: [88382] complexed with sam |
PDB Entry: 1uak (more details), 2.05 Å
SCOP Domain Sequences for d1uaka_:
Sequence, based on SEQRES records: (download)
>d1uaka_ c.116.1.4 (A:) tRNA(m1G37)-methyltransferase TrmD {Haemophilus influenzae} shmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddrpygggp gmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvcgryegi derliqteideewsigdyvltggelpamtlidavarfipgvlgkqasaeedsfadglldc phytrpevlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltdeqrkllk eaqaehnslehh
>d1uaka_ c.116.1.4 (A:) tRNA(m1G37)-methyltransferase TrmD {Haemophilus influenzae} shmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddrpygggp gmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvcgryegi derliqteideewsigdyvltggelpamtlidavarfipgvlsfadglldcphytrpevl egltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltdeqrkllkeaqaehnsl ehh
Timeline for d1uaka_: