Lineage for d1pvof2 (1pvo F:48-126)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2381452Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2382744Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2383132Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (32 protein domains)
    barrel, closed; n=5, S=8
  6. 2383350Protein Rho termination factor, RNA-binding domain [68910] (1 species)
  7. 2383351Species Escherichia coli [TaxId:562] [68911] (9 PDB entries)
    Uniprot P03002
  8. 2383369Domain d1pvof2: 1pvo F:48-126 [88331]
    Other proteins in same PDB: d1pvoa1, d1pvoa3, d1pvob2, d1pvoc1, d1pvoc3, d1pvod1, d1pvod3, d1pvoe1, d1pvoe3, d1pvof1, d1pvof3
    protein/RNA complex; complexed with anp

Details for d1pvof2

PDB Entry: 1pvo (more details), 3 Å

PDB Description: x-ray crystal structure of rho transcription termination factor in complex with ssrna substrate and anppnp
PDB Compounds: (F:) transcription termination factor rho

SCOPe Domain Sequences for d1pvof2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1pvof2 b.40.4.5 (F:48-126) Rho termination factor, RNA-binding domain {Escherichia coli [TaxId: 562]}
difgdgvleilqdgfgflrsadssylagpddiyvspsqirrfnlrtgdtisgkirppkeg
eryfallkvnevnfdkpen

SCOPe Domain Coordinates for d1pvof2:

Click to download the PDB-style file with coordinates for d1pvof2.
(The format of our PDB-style files is described here.)

Timeline for d1pvof2: