Lineage for d1pnyd_ (1pny D:)

  1. Root: SCOPe 2.05
  2. 1970697Class i: Low resolution protein structures [58117] (25 folds)
  3. 1970698Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
  4. 1970699Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families) (S)
  5. 1970700Family i.1.1.1: Ribosome complexes [58120] (3 proteins)
  6. 1970701Protein 70S ribosome functional complex [58121] (4 species)
  7. 1970702Species Escherichia coli [TaxId:562] [58123] (72 PDB entries)
  8. 1970974Domain d1pnyd_: 1pny D: [88254]
    50S subunit; the coordinates of 30S subunit in 1pnx
    protein/RNA complex
    protein/RNA complex

Details for d1pnyd_

PDB Entry: 1pny (more details), 9.5 Å

PDB Description: crystal structure of the wild type ribosome from e. coli, 50s subunit of 70s ribosome. this file, 1pny, contains only molecules of the 50s ribosomal subunit. the 30s subunit is in the pdb file 1pnx.
PDB Compounds: (D:) 50S ribosomal protein L5

SCOPe Domain Sequences for d1pnyd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1pnyd_ i.1.1.1 (D:) 70S ribosome functional complex {Escherichia coli [TaxId: 562]}
qqlktkyndqvrpalmqqfgyssvmavpriekivvneglgsskedskaidkaakelalit
lqkpiitkakksisnfklrqgmpvgikvtlrgermyvflekliniglprirdfrginpna
fdgrgnynlgikeqlifpeitydmvdktrgmditivttaktdeearallqsmglpfrk

SCOPe Domain Coordinates for d1pnyd_:

Click to download the PDB-style file with coordinates for d1pnyd_.
(The format of our PDB-style files is described here.)

Timeline for d1pnyd_: