Lineage for d1pbqa_ (1pbq A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2144293Family c.94.1.1: Phosphate binding protein-like [53851] (45 protein domains)
  6. 2144965Protein N-methyl-D-aspartate receptor subunit 1 [89787] (3 species)
  7. 2144966Species Norway rat (Rattus norvegicus) [TaxId:10116] [89788] (23 PDB entries)
  8. 2144974Domain d1pbqa_: 1pbq A: [88028]
    complexed with dk1

Details for d1pbqa_

PDB Entry: 1pbq (more details), 1.9 Å

PDB Description: crystal structure of the nr1 ligand binding core in complex with 5,7-dichlorokynurenic acid (dcka) at 1.90 angstroms resolution
PDB Compounds: (A:) N-methyl-D-aspartate Receptor Subunit 1

SCOPe Domain Sequences for d1pbqa_:

Sequence, based on SEQRES records: (download)

>d1pbqa_ c.94.1.1 (A:) N-methyl-D-aspartate receptor subunit 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}

Sequence, based on observed residues (ATOM records): (download)

>d1pbqa_ c.94.1.1 (A:) N-methyl-D-aspartate receptor subunit 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}

SCOPe Domain Coordinates for d1pbqa_:

Click to download the PDB-style file with coordinates for d1pbqa_.
(The format of our PDB-style files is described here.)

Timeline for d1pbqa_: