SCOPe 2.06: Domain d1p9ud_: 1p9u D:

Lineage for d1p9ud_ (1p9u D:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)

5. Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 proteins)

6. Protein Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (6 species)
   contains an extra alpha-helical domain

7. Species Transmissible gastroenteritis virus [TaxId:11149] [74980] (3 PDB entries)

8. Domain d1p9ud_: 1p9u D: [88004]
   complexed with mrd, so4

Details for d1p9ud_

PDB Entry: 1p9u, 2.37 Å

PDB Description: coronavirus main proteinase (3clpro) structure: basis for design of anti-sars drugs

PDB Compounds: (D:) putative coronavirus nsp2 (3CL-PRO)

SCOPe Domain Sequences for d1p9ud_:

Sequence; same for both SEQRES and ATOM records:

>d1p9ud_ b.47.1.4 (D:) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {Transmissible gastroenteritis virus [TaxId: 11149]}
sglrkmaqpsglvepcivrvsygnnvlnglwlgdevicprhviasdttrvinyenemssv
rlhnfsvsknnvflgvvsarykgvnlvlkvnqvnpntpehkfksikagesfnilacyegc
pgsvygvnmrsqgtikgsfiagtcgsvgyvlengilyfvymhhlelgngshvgsnfegem
yggyedqpsmqlegtnvmssdnvvaflyaalingerwfvtntsmslesyntwaktnsfte
lsstdafsmlaaktgqsveklldsivrlnkgfggrtilsygslcdeftptevirqmygvn
l

Timeline for d1p9ud_:

• d1p9ud_ first appeared in SCOP 1.65
  
• d1p9ud_ appears in SCOPe 2.05
  
• d1p9ud_ appears in SCOPe 2.07
  
• d1p9ud_ appears in the current release, SCOPe 2.08