Lineage for d1p9ub_ (1p9u B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2387558Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2387559Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2389935Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 protein domains)
  6. 2389994Protein Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (6 species)
    contains an extra alpha-helical domain
  7. 2390114Species Transmissible gastroenteritis virus [TaxId:11149] [74980] (3 PDB entries)
  8. 2390122Domain d1p9ub_: 1p9u B: [88002]
    complexed with mrd, so4

Details for d1p9ub_

PDB Entry: 1p9u (more details), 2.37 Å

PDB Description: coronavirus main proteinase (3clpro) structure: basis for design of anti-sars drugs
PDB Compounds: (B:) putative coronavirus nsp2 (3CL-PRO)

SCOPe Domain Sequences for d1p9ub_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1p9ub_ b.47.1.4 (B:) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {Transmissible gastroenteritis virus [TaxId: 11149]}

SCOPe Domain Coordinates for d1p9ub_:

Click to download the PDB-style file with coordinates for d1p9ub_.
(The format of our PDB-style files is described here.)

Timeline for d1p9ub_: