Lineage for d1p0kb_ (1p0k B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080000Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) (S)
  5. 2080001Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 protein domains)
  6. 2080270Protein Isopentenyl-diphosphate delta-isomerase [89454] (3 species)
  7. 2080271Species Bacillus subtilis [TaxId:1423] [89455] (2 PDB entries)
  8. 2080273Domain d1p0kb_: 1p0k B: [87649]
    complexed with po4

Details for d1p0kb_

PDB Entry: 1p0k (more details), 1.9 Å

PDB Description: IPP:DMAPP isomerase type II apo structure
PDB Compounds: (B:) Isopentenyl-diphosphate delta-isomerase

SCOPe Domain Sequences for d1p0kb_:

Sequence, based on SEQRES records: (download)

>d1p0kb_ c.1.4.1 (B:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]}
etgldditfvhvslpdlaleqvdistkigelsssspifinamtggggkltyeinkslara
asqagiplavgsqmsalkdpserlsyeivrkenpnglifanlgseataaqakeavemiga
nalqihlnviqeivmpegdrsfsgalkrieqicsrvsvpvivkevgfgmskasagklyea
gaaavdiggyggtnfskienlrrqrqisffnswgistaaslaeirsefpastmiasgglq
daldvakaialgasctgmaghflkaltdsgeeglleeiqlileelklimtvlgartiadl
qkaplvikgethhwltergvntssysvr

Sequence, based on observed residues (ATOM records): (download)

>d1p0kb_ c.1.4.1 (B:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]}
etgldditfvhvslpdlaleqvdistkigelsssspifinamtggggkltyeinkslara
asqagiplavgsqmsalkdpserlsyeivrkenpnglifanlgseataaqakeavemiga
nalqihlnviqeivmrsfsgalkrieqicsrvsvpvivkevgfgmskasagklyeagaaa
vdiggrqisffnswgistaaslaeirsefpastmiasgglqdaldvakaialgasctgma
ghflkaltdsgeeglleeiqlileelklimtvlgartiadlqkaplvikgethhwlterg
vntssysvr

SCOPe Domain Coordinates for d1p0kb_:

Click to download the PDB-style file with coordinates for d1p0kb_.
(The format of our PDB-style files is described here.)

Timeline for d1p0kb_: