Lineage for d1ooaa1 (1ooa A:251-350)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2375023Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2375024Family b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain [81279] (8 proteins)
    subgroup of the larger IPT/TIG domain family
  6. 2375038Protein p50 subunit of NF-kappa B transcription factor [49248] (2 species)
  7. 2375044Species Mouse (Mus musculus) [TaxId:10090] [49250] (15 PDB entries)
  8. 2375050Domain d1ooaa1: 1ooa A:251-350 [87192]
    Other proteins in same PDB: d1ooaa2, d1ooaa3, d1ooab2, d1ooab3
    protein/RNA complex

Details for d1ooaa1

PDB Entry: 1ooa (more details), 2.45 Å

PDB Description: crystal structure of nf-kb(p50)2 complexed to a high-affinity rna aptamer
PDB Compounds: (A:) Nuclear factor NF-kappa-B p105 subunit

SCOPe Domain Sequences for d1ooaa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ooaa1 b.1.18.1 (A:251-350) p50 subunit of NF-kappa B transcription factor {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d1ooaa1:

Click to download the PDB-style file with coordinates for d1ooaa1.
(The format of our PDB-style files is described here.)

Timeline for d1ooaa1: