SCOP 1.65: Domain d1onwb2: 1onw B:63-346

Lineage for d1onwb2 (1onw B:63-346)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (13 families)
   the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
   has transition metal ions bound inside the barrel

5. Family c.1.9.13: Isoaspartyl dipeptidase, catalytic domain [89489] (1 protein)

6. Protein Isoaspartyl dipeptidase, catalytic domain [89490] (1 species)

7. Species Escherichia coli [TaxId:562] [89491] (2 PDB entries)

8. Domain d1onwb2: 1onw B:63-346 [87175]
   Other proteins in same PDB: d1onwa1, d1onwb1
   complexed with cl, egl, kcx, mg, na, zn

Details for d1onwb2

PDB Entry: 1onw, 1.65 Å

PDB Description: crystal structure of isoaspartyl dipeptidase from e. coli

SCOP Domain Sequences for d1onwb2:

Sequence, based on SEQRES records:

>d1onwb2 c.1.9.13 (B:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli}
gfidqhvhliggggeagpttrtpevalsrlteagvtsvvgllgtdsisrhpesllaktra
lneegisawmltgayhvpsrtitgsvekdvaiidrvigvkcaisdhrsaapdvyhlanma
aesrvggllggkpgvtvfhmgdskkalqpiydllencdvpiskllpthvnrnvplfeqal
efarkggtiditssidepvapaegiaravqagiplarvtlssdgngsqpffddegnlthi
gvagfetlletvqvlvkdydfsisdalrpltssvagflnltgkg

Sequence, based on observed residues (ATOM records):

>d1onwb2 c.1.9.13 (B:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli}
gfidqhvhliggggeagpttrtpevalsrlteagvtsvvgllgtdsisrhpesllaktra
lneegisawmltgayhvpsrtitgsvekdvaiidrvigvkcaisdhrsaapdvyhlanma
aesrvggllggkpgvtvfhmgdskkalqpiydllencdvpiskllpthvnrnvplfeqal
efarkggtiditssidepvapaegiaravqagiplarvtlssdgngsqphigvagfetll
etvqvlvkdydfsisdalrpltssvagflnltgkg

Timeline for d1onwb2:

• d1onwb2 is new in SCOP 1.65
  
• d1onwb2 appears in SCOP 1.67
  
• d1onwb2 appears in the current release, SCOPe 2.08