SCOPe 2.06: Domain d1ofeb2: 1ofe B:431-1239

Lineage for d1ofeb2 (1ofe B:431-1239)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Alpha subunit of glutamate synthase, central and FMN domains [69381] (2 species)
   Central domain (residues 423-780) may be a rudiment form of the FMN domain

7. Species Synechocystis sp. [TaxId:1143] [75055] (5 PDB entries)

8. Domain d1ofeb2: 1ofe B:431-1239 [86945]
   Other proteins in same PDB: d1ofea1, d1ofea3, d1ofeb1, d1ofeb3
   complexed with akg, f3s, fmn, onl

Details for d1ofeb2

PDB Entry: 1ofe, 2.45 Å

PDB Description: glutamate synthase from synechocystis sp in complex with 2-oxoglutarate and l-don at 2.45 angstrom resolution

PDB Compounds: (B:) ferredoxin-dependent glutamate synthase 2

SCOPe Domain Sequences for d1ofeb2:

Sequence, based on SEQRES records:

>d1ofeb2 c.1.4.1 (B:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]}
faektlfndaqtvlqqqaafgytaedvemvvvpmasqgkeptfcmgddtplavlshkprl
lydyfkqrfaqvtnppidplrenlvmslamflgkrgnllepkaesartiklrsplvneve
lqaiktgqlqvaevstlydldgvnsledaltnlvktaiatvqagaeilvltdrpngailt
enqsfippllavgavhhhliraglrlkaslivdtaqcwsthhfaclvgygasaicpylal
esvrqwwldektqklmengrldridlptalknyrqsveaglfkilskmgisllasyhgaq
ifeaiglgaelveyafagttsrvggltiadvagevmvfhgmafpemakklenfgfvnyrp
ggeyhmnspemskslhkavaaykvggngnngeaydhyelyrqylkdrpvtalrdlldfna
dqpaisleevesvesivkrfctggmslgalsreahetlaiamnrlgaksnsgeggedvvr
yltlddvdsegnsptlphlhglqngdtansaikqiasgrfgvtpeylmsgkqleikmaqg
akpgeggqlpgkkvseyiamlrrskpgvtlisppphhdiysiedlaqliydlhqinpeaq
vsvklvaeigigtiaagvakanadiiqisghdggtgasplssikhagspwelgvtevhrv
lmenqlrdrvllradgglktgwdvvmaalmgaeeygfgsiamiaegcimarvchtnncpv
gvatqqerlrqrfkgvpgqvvnffyfiaeevrsllahlgyrslddiigrtdllkvrsdvq
lsktqnltldcllnlpdtkqnrqwlnhep

Sequence, based on observed residues (ATOM records):

>d1ofeb2 c.1.4.1 (B:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]}
faektlfndaqtvlqqqaafgytaedvemvvvpmasqgkeptfcmgddtplavlshkprl
lydyfkqrfaqvtnppidplrenlvmslamflgkrgnllepkaesartiklrsplvneve
lqaiktgqlqvaevstlydnsledaltnlvktaiatvqagaeilvltdrpngailtenqs
fippllavgavhhhliraglrlkaslivdtaqcwsthhfaclvgygasaicpylalesvr
qwwldektqklmengrlidlptalknyrqsveaglfkilskmgisllasyhgaqifeaig
lgaelveyafagttsrvggltiadvagevmvfhgmafkklenfgfvnyrpggeyhmnspe
mskslhkavaaydhyelyrqylkdrpvtalrdlldfnadqpaisleevesvesivkrfct
ggmslgalsreahetlaiamnrlgaksnsgeggedvvryltlddvdsegnsptlphlhgl
qngdtansaikqiasgrfgvtpeylmsgkqleikmaqgakpgeggqlpgkkvseyiamlr
rskpgvtlisppphhdiysiedlaqliydlhqinpeaqvsvklvaeigigtiaagvakan
adiiqisghdggtgasplssikhagspwelgvtevhrvlmenqlrdrvllradgglktgw
dvvmaalmgaeeygfgsiamiaegcimarvchtnncpvgvatqqerlrqrfkgvpgqvvn
ffyfiaeevrsllahlgyrslddiigrtdllkvrsdvqlsktqnltldcllnlpdtkqnr
qwlnhep

Timeline for d1ofeb2:

• d1ofeb2 first appeared in SCOP 1.65
  
• d1ofeb2 appears in SCOPe 2.05
  
• d1ofeb2 appears in SCOPe 2.07
  
• d1ofeb2 appears in the current release, SCOPe 2.08