SCOP 1.73: Domain d1od5a2: 1od5 A:321-493

Lineage for d1od5a2 (1od5 A:321-493)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.1: RmlC-like cupins [51182] (20 families)

5. Family b.82.1.2: Germin/Seed storage 7S protein [51187] (4 proteins)

6. Protein Seed storage 7S protein [51188] (6 species)
   duplication: consists of two germin-like domains spatially arranged as subunits in the RmlC dimer; trimer is similar to the germin hexamer

7. Species Soybean (Glycine max), glycinin A3B4 [TaxId:3847] [89412] (1 PDB entry)

8. Domain d1od5a2: 1od5 A:321-493 [86833]

Details for d1od5a2

PDB Entry: 1od5, 2.1 Å

PDB Description: crystal structure of glycinin a3b4 subunit homohexamer

PDB Compounds: (A:) glycinin

SCOP Domain Sequences for d1od5a2:

Sequence; same for both SEQRES and ATOM records:

>d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]}
gveenictmklheniarpsradfynpkagristlnsltlpalrqfglsaqyvvlyrngiy
sphwnlnansviyvtrgkgrvrvvncqgnavfdgelrrgqllvvpqnfvvaeqggeqgle
yvvfkthhnavssyikdvfraipsevlsnsynlgqsqvrqlkyqgnsgplvnp

Timeline for d1od5a2:

• d1od5a2 first appeared in SCOP 1.65
  
• d1od5a2 appears in SCOP 1.71
  
• d1od5a2 appears in SCOP 1.75
  
• d1od5a2 appears in the current release, SCOPe 2.08