SCOP 1.67: Domain d1ocmb_: 1ocm B:

Lineage for d1ocmb_ (1ocm B:)

1. Root: SCOP 1.67

2. Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

3. Fold c.117: Amidase signature (AS) enzymes [75303] (1 superfamily)
   possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest

4. Superfamily c.117.1: Amidase signature (AS) enzymes [75304] (1 family)

5. Family c.117.1.1: Amidase signature (AS) enzymes [75305] (3 proteins)

6. Protein Malonamidase E2 [75306] (1 species)

7. Species Bradyrhizobium japonicum [TaxId:375] [75307] (12 PDB entries)

8. Domain d1ocmb_: 1ocm B: [86807]
   complexed with pop

Details for d1ocmb_

PDB Entry: 1ocm, 1.9 Å

PDB Description: the crystal structure of malonamidase e2 covalently complexed with pyrophosphate from bradyrhizobium japonicum

SCOP Domain Sequences for d1ocmb_:

Sequence; same for both SEQRES and ATOM records:

>d1ocmb_ c.117.1.1 (B:) Malonamidase E2 {Bradyrhizobium japonicum}
misladlqrrietgelspnaaiaqshaaiearekevhafvrhdksaraqasgplrgiavg
ikdiidtanmptemgseiyrgwqprsdapvvmmlkragatiigkttttafasrdptatln
phntghspggsssgsaaavgagmiplalgtqtggsvirpaaycgtaaikpsfrmlptvgv
kcyswaldtvglfgaraedlargllamtgrsefsgivpakaprigvvrqefagavepaae
qglqaaikaaeragasvqaidlpeavheawrihpiiqdfeahralawefsehhdeiapml
rasldatvgltpkeydearrigrrgrrelgevfegvdvlltysapgtapakalastgdpr
ynrlwtlmgnpcvnvpvlkvgglpigvqviarfgndahalatawfledalak

Timeline for d1ocmb_:

• d1ocmb_ first appeared in SCOP 1.65
  
• d1ocmb_ appears in SCOP 1.69
  
• d1ocmb_ appears in the current release, SCOPe 2.08