SCOPe 2.05: Domain d1obfp2: 1obf P:153-314

Lineage for d1obfp2 (1obf P:153-314)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.81: FwdE/GAPDH domain-like [55346] (4 superfamilies)
   core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1

4. Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families)
   N-terminal domain is the classic Rossmann-fold

5. Family d.81.1.1: GAPDH-like [55348] (6 proteins)
   has many additional secondary structures

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349] (19 species)

7. Species Achromobacter xylosoxidans [TaxId:85698] [89987] (1 PDB entry)
   formerly Alcaligenes xylosoxidans

8. Domain d1obfp2: 1obf P:153-314 [86771]
   Other proteins in same PDB: d1obfo1, d1obfp1
   complexed with k, pg4, so4

Details for d1obfp2

PDB Entry: 1obf, 1.7 Å

PDB Description: The crystal structure of Glyceraldehyde 3-phosphate Dehydrogenase from Alcaligenes xylosoxidans at 1.7A resolution.

PDB Compounds: (P:) glyceraldehyde 3-phosphate dehydrogenase

SCOPe Domain Sequences for d1obfp2:

Sequence; same for both SEQRES and ATOM records:

>d1obfp2 d.81.1.1 (P:153-314) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}
scttnclaplvkplndklglqdglmttvhaytnnqvltdvyhedlrrarsatmsmiptkt
gaaaavgdvlpeldgklngyairvptinvsivdlsfvakrnttveevngilkaasegelk
gildynteplvsvdynhdpasstvdasltkvsgrlvkvsswy

Timeline for d1obfp2:

• d1obfp2 first appeared in SCOP 1.65
  
• d1obfp2 appears in SCOPe 2.04
  
• d1obfp2 appears in SCOPe 2.06
  
• d1obfp2 appears in the current release, SCOPe 2.08