SCOPe 2.05: Domain d1obfp1: 1obf P:1-152,P:315-335

Lineage for d1obfp1 (1obf P:1-152,P:315-335)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
   family members also share a common alpha+beta fold in C-terminal domain

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (19 species)

7. Species Achromobacter xylosoxidans [TaxId:85698] [89526] (1 PDB entry)
   formerly Alcaligenes xylosoxidans

8. Domain d1obfp1: 1obf P:1-152,P:315-335 [86770]
   Other proteins in same PDB: d1obfo2, d1obfp2
   complexed with k, pg4, so4

Details for d1obfp1

PDB Entry: 1obf, 1.7 Å

PDB Description: The crystal structure of Glyceraldehyde 3-phosphate Dehydrogenase from Alcaligenes xylosoxidans at 1.7A resolution.

PDB Compounds: (P:) glyceraldehyde 3-phosphate dehydrogenase

SCOPe Domain Sequences for d1obfp1:

Sequence; same for both SEQRES and ATOM records:

>d1obfp1 c.2.1.3 (P:1-152,P:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}
tirvaingygrigrnilrahyeggkshdieivaindlgdpktnahltrydtahgkfpgtv
svngsymvvngdkirvdanrnpaqlpwgalkvdvvlectgffttkekagahikggakkvi
isapggadvdatvvygvnhgtlkstdtvisnaXdnewgfsnrmldttvalmsaa

Timeline for d1obfp1:

• d1obfp1 first appeared in SCOP 1.65
  
• d1obfp1 appears in SCOPe 2.04
  
• d1obfp1 appears in SCOPe 2.06
  
• d1obfp1 appears in the current release, SCOPe 2.08