Lineage for d1obfo1 (1obf O:1-152,O:315-335)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 387036Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 387037Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (11 families) (S)
  5. 387801Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (14 proteins)
    family members also share a common alpha+beta fold in C-terminal domain
  6. 387918Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (16 species)
  7. 387919Species Achromobacter xylosoxidans [TaxId:85698] [89526] (1 PDB entry)
    formerly Alcaligenes xylosoxidans
  8. 387920Domain d1obfo1: 1obf O:1-152,O:315-335 [86768]
    Other proteins in same PDB: d1obfo2, d1obfp2

Details for d1obfo1

PDB Entry: 1obf (more details), 1.7 Å

PDB Description: The crystal structure of Glyceraldehyde 3-phosphate Dehydrogenase from Alcaligenes xylosoxidans at 1.7A resolution.

SCOP Domain Sequences for d1obfo1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans}
tirvaingygrigrnilrahyeggkshdieivaindlgdpktnahltrydtahgkfpgtv
svngsymvvngdkirvdanrnpaqlpwgalkvdvvlectgffttkekagahikggakkvi
isapggadvdatvvygvnhgtlkstdtvisnaXdnewgfsnrmldttvalmsaa

SCOP Domain Coordinates for d1obfo1:

Click to download the PDB-style file with coordinates for d1obfo1.
(The format of our PDB-style files is described here.)

Timeline for d1obfo1:

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Domains from same chain:
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d1obfo2