Lineage for d1o4ub1 (1o4u B:104-273)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089241Superfamily c.1.17: Nicotinate/Quinolinate PRTase C-terminal domain-like [51690] (3 families) (S)
    incomplete beta/alpha barrel with parallel beta-sheet of 7 strands
  5. 2089242Family c.1.17.1: NadC C-terminal domain-like [51691] (4 protein domains)
  6. 2089261Protein Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain [51692] (3 species)
  7. 2089290Species Thermotoga maritima [TaxId:2336] [89507] (1 PDB entry)
    TM1645
  8. 2089292Domain d1o4ub1: 1o4u B:104-273 [86626]
    Other proteins in same PDB: d1o4ua2, d1o4ub2
    structural genomics

Details for d1o4ub1

PDB Entry: 1o4u (more details), 2.5 Å

PDB Description: crystal structure of a nicotinate nucleotide pyrophosphorylase (tm1645) from thermotoga maritima at 2.50 a resolution
PDB Compounds: (B:) Type II quinolic acid phosphoribosyltransferase

SCOPe Domain Sequences for d1o4ub1:

Sequence, based on SEQRES records: (download)

>d1o4ub1 c.1.17.1 (B:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
vatttrrfaeklkhakiaatrkilpglgvlqkiavvhgggdphrldlsgcvmikdnhlkm
ygsaeravqevrkiipfttkievevenledalraveagadivmldnlspeevkdisrrik
dinpnvivevsggiteenvslydfetvdvisssrltlqevfvdlsleiqr

Sequence, based on observed residues (ATOM records): (download)

>d1o4ub1 c.1.17.1 (B:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
vatttrrfaeklkhakiaatrkilpglgvlqkiavvhgggdgcvmikdnhlkmygsaera
vqevrkiipfttkievevenledalraveagadivmldnlspeevkdisrrikdinpnvi
vevsggiteenvslydfetvdvisssrltlqevfvdlsleiqr

SCOPe Domain Coordinates for d1o4ub1:

Click to download the PDB-style file with coordinates for d1o4ub1.
(The format of our PDB-style files is described here.)

Timeline for d1o4ub1:

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Domains from same chain:
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d1o4ub2