Lineage for d1nvmc2 (1nvm C:3-290)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1815292Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1821671Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 1822872Family c.1.10.5: HMGL-like [89494] (3 proteins)
    Pfam PF00682
  6. 1822877Protein 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain [89495] (1 species)
  7. 1822878Species Pseudomonas sp. [TaxId:306] [89496] (1 PDB entry)
    gene product DmpG
  8. 1822880Domain d1nvmc2: 1nvm C:3-290 [86254]
    Other proteins in same PDB: d1nvma1, d1nvmb1, d1nvmb2, d1nvmc1, d1nvmd1, d1nvmd2, d1nvme1, d1nvmf1, d1nvmf2, d1nvmg1, d1nvmh1, d1nvmh2
    complexed with mn, mpd, nad, oxl, so4

Details for d1nvmc2

PDB Entry: 1nvm (more details), 1.7 Å

PDB Description: crystal structure of a bifunctional aldolase-dehydrogenase : sequestering a reactive and volatile intermediate
PDB Compounds: (C:) 4-hydroxy-2-oxovalerate aldolase

SCOPe Domain Sequences for d1nvmc2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nvmc2 c.1.10.5 (C:3-290) 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain {Pseudomonas sp. [TaxId: 306]}
fnpskklyisdvtlrdgshairhqytlddvraiaraldkakvdsievahgdglqgssfny
gfgrhtdleyieavageishaqiatlllpgigsvhdlknayqagarvvrvathcteadvs
kqhieyarnlgmdtvgflmmshmipaeklaeqgklmesygatciymadsggamsmndird
rmrafkavlkpetqvgmhahhnlslgvansivaveegcdrvdaslagmgagagnaplevf
iavaerlgwnhgtdlytlmdaaddivrplqdrpvrvdretlglgyagv

SCOPe Domain Coordinates for d1nvmc2:

Click to download the PDB-style file with coordinates for d1nvmc2.
(The format of our PDB-style files is described here.)

Timeline for d1nvmc2: