Lineage for d1npyb1 (1npy B:103-270)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2093723Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 protein domains)
    extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
  6. 2094001Protein Shikimate 5-dehydrogenase-like protein HI0607 [89536] (1 species)
  7. 2094002Species Haemophilus influenzae [TaxId:727] [89537] (1 PDB entry)
  8. 2094004Domain d1npyb1: 1npy B:103-270 [85997]
    Other proteins in same PDB: d1npya2, d1npyb2, d1npyc2, d1npyd2
    structural genomics
    complexed with ace

Details for d1npyb1

PDB Entry: 1npy (more details), 1.75 Å

PDB Description: Structure of shikimate 5-dehydrogenase-like protein HI0607
PDB Compounds: (B:) Hypothetical shikimate 5-dehydrogenase-like protein HI0607

SCOPe Domain Sequences for d1npyb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1npyb1 c.2.1.7 (B:103-270) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

SCOPe Domain Coordinates for d1npyb1:

Click to download the PDB-style file with coordinates for d1npyb1.
(The format of our PDB-style files is described here.)

Timeline for d1npyb1: