Lineage for d1ncwh1 (1ncw H:1-113)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287195Protein Immunoglobulin heavy chain variable domain, VH [88543] (19 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 287668Species Mouse (Mus musculus), cluster 7.1 [TaxId:10090] [88557] (27 PDB entries)
  8. 287669Domain d1ncwh1: 1ncw H:1-113 [85555]
    Other proteins in same PDB: d1ncwh2, d1ncwl1, d1ncwl2
    part of cationic cyclization catalytic Fab 4C6
    complexed with bez, gol

Details for d1ncwh1

PDB Entry: 1ncw (more details), 1.3 Å

PDB Description: Cationic Cyclization Antibody 4C6 in Complex with Benzoic Acid
PDB Compounds: (H:)

SCOP Domain Sequences for d1ncwh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ncwh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 7.1}
rvqlqqsgpglvkpsqslsltctvtgysitsdfawnwirqfpgnklewmgyinysgftsh
npslksrisitrdtsknqfflqlnsvttedtatyycagllwydggagswgqgtlvtvsa

SCOP Domain Coordinates for d1ncwh1:

Click to download the PDB-style file with coordinates for d1ncwh1.
(The format of our PDB-style files is described here.)

Timeline for d1ncwh1:

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Domains from same chain:
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d1ncwh2