Lineage for d1nbya1 (1nby A:1-107)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 452039Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (162 PDB entries)
  8. 452058Domain d1nbya1: 1nby A:1-107 [85536]
    Other proteins in same PDB: d1nbya2, d1nbyb1, d1nbyb2, d1nbyc_
    part of anti-lysozyme Fab HYHEL-63

Details for d1nbya1

PDB Entry: 1nby (more details), 1.8 Å

PDB Description: Crystal Structure of HyHEL-63 complexed with HEL mutant K96A

SCOP Domain Sequences for d1nbya1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nbya1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
divltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikyasqsisgips
rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpytfgggtkleik

SCOP Domain Coordinates for d1nbya1:

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Timeline for d1nbya1: