Lineage for d1ms1b2 (1ms1 B:1-399)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2064980Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 2064981Superfamily b.68.1: Sialidases [50939] (3 families) (S)
  5. 2064982Family b.68.1.1: Sialidases (neuraminidases) [50940] (10 protein domains)
  6. 2065231Protein Trypanosoma sialidase [82164] (2 species)
  7. 2065232Species Trypanosoma cruzi [TaxId:5693] [89371] (13 PDB entries)
    Uniprot Q26966
  8. 2065243Domain d1ms1b2: 1ms1 B:1-399 [85067]
    Other proteins in same PDB: d1ms1a1, d1ms1b1
    complexed with dan, gol

Details for d1ms1b2

PDB Entry: 1ms1 (more details), 1.8 Å

PDB Description: Monoclinic form of Trypanosoma cruzi trans-sialidase, in complex with 3-deoxy-2,3-dehydro-N-acetylneuraminic acid (DANA)
PDB Compounds: (B:) Trans-sialidase

SCOPe Domain Sequences for d1ms1b2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ms1b2 b.68.1.1 (B:1-399) Trypanosoma sialidase {Trypanosoma cruzi [TaxId: 5693]}
lapgssrvelfkrqsskvpfekdgkvtervvhsfrlpalvnvdgvmvaiadaryetsfdn
slidtvakysvddgetwetqiaiknsrassvsrvvdptvivkgnklyvlvgsynssrsyw
tshgdardwdillavgevtkstaggkitasikwgspvslkeffpaemegmhtnqflggag
vaivasngnlvypvqvtnkkkqvfskifysedegktwkfgkgrsafgcsepvalewegkl
iintrvdyrrrlvyessdmgntwleavgtlsrvwgpspksnqpgsqssftavtiegmrvm
lfthplnfkgrwlrdrlnlwltdnqriynvgqvsigdensayssvlykddklyclheins
nevyslvfarlvgelriiksvlqswknwdshlssictpa

SCOPe Domain Coordinates for d1ms1b2:

Click to download the PDB-style file with coordinates for d1ms1b2.
(The format of our PDB-style files is described here.)

Timeline for d1ms1b2:

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Domains from same chain:
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d1ms1b1