SCOPe 2.08: Domain d1ms1b1: 1ms1 B:410-632

Lineage for d1ms1b1 (1ms1 B:410-632)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families)

5. Family b.29.1.15: Trypanosoma sialidase, C-terminal domain [82038] (1 protein)

6. Protein Trypanosoma sialidase, C-terminal domain [82039] (2 species)

7. Species Trypanosoma cruzi [TaxId:5693] [89271] (13 PDB entries)
   Uniprot Q26966

8. Domain d1ms1b1: 1ms1 B:410-632 [85066]
   Other proteins in same PDB: d1ms1a2, d1ms1b2
   complexed with dan, gol

Details for d1ms1b1

PDB Entry: 1ms1, 1.8 Å

PDB Description: monoclinic form of trypanosoma cruzi trans-sialidase, in complex with 3-deoxy-2,3-dehydro-n-acetylneuraminic acid (dana)

PDB Compounds: (B:) Trans-sialidase

SCOPe Domain Sequences for d1ms1b1:

Sequence; same for both SEQRES and ATOM records:

>d1ms1b1 b.29.1.15 (B:410-632) Trypanosoma sialidase, C-terminal domain {Trypanosoma cruzi [TaxId: 5693]}
cgpavttvglvgflshsatktewedayrcvnastanaervpnglkfagvgggalwpvsqq
gqnqryhfanhaftlvasvtihevpkgaspllgasldssggkkllglsydkrhqwqpiyg
stpvtptgswemgkryhvvltmankigsvyidgeplegsgqtvvpdertpdishfyvggy
krsgmptdsrvtvnnvllynrqlnaeeirtlflsqdligteah

Timeline for d1ms1b1:

• d1ms1b1 first appeared in SCOP 1.65
  
• d1ms1b1 appears in SCOPe 2.07