SCOPe 2.07: Domain d1mkia1: 1mki A:1-327

Lineage for d1mkia1 (1mki A:1-327)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.2: Glutaminase [90084] (2 proteins)
   Pfam PF04960

6. Protein Probable glutaminase YbgJ [90085] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [90086] (4 PDB entries)

8. Domain d1mkia1: 1mki A:1-327 [84994]
   Other proteins in same PDB: d1mkia2, d1mkib2
   structural genomics
   complexed with edo, fmt

Details for d1mkia1

PDB Entry: 1mki, 2 Å

PDB Description: crystal structure of bacillus subtilis probable glutaminase, apc1040

PDB Compounds: (A:) Probable Glutaminase ybgJ

SCOPe Domain Sequences for d1mkia1:

Sequence, based on SEQRES records:

>d1mkia1 e.3.1.2 (A:1-327) Probable glutaminase YbgJ {Bacillus subtilis [TaxId: 1423]}
mkelikehqkdinpalqlhdwveyyrpfaangqsanyipalgkvndsqlgicvlepdgtm
ihagdwnvsftmqsiskvisfiaacmsrgipyvldrvdveptgdafnsiirleinkpgkp
fnpminagaltiasilpgesayekleflysvmetligkrpriheevfrsewetahrnral
ayylketnfleaeveetlevylkqcamesttedialiglilahdgyhpirheqvipkdva
klakalmltcgmynasgkyaafvgvpaksgvsggimalvppsarreqpfqsgcgigiygp
aideygnsltggmllkhmaqewelsif

Sequence, based on observed residues (ATOM records):

>d1mkia1 e.3.1.2 (A:1-327) Probable glutaminase YbgJ {Bacillus subtilis [TaxId: 1423]}
mkelinpalqlhdwveyyrpfaangqsandsqlgicvlepdgtmihagdwnvsftmqsis
kvisfiaacmsrgipyvldrvdveptgdafnsiirleinkpgkpfnpminagaltiasil
pgesayekleflysvmetligkrpriheevfrsewetahrnralayylketnfleaevee
tlevylkqcamesttedialiglilahdgyhpirheqvipkdvaklakalmltcgmynas
gkyaafvgvpaksgvsggimalvppsarreqpfqsgcgigiygpaideygnsltggmllk
hmaqewelsif

Timeline for d1mkia1:

• d1mkia1 first appeared in SCOP 1.65, called d1mkia_
  
• d1mkia1 appears in SCOPe 2.06
  
• d1mkia1 appears in the current release, SCOPe 2.08