SCOPe 2.08: Domain d1m65a_: 1m65 A:

Lineage for d1m65a_ (1m65 A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
   variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands

4. Superfamily c.6.3: PHP domain-like [89550] (3 families)

5. Family c.6.3.1: PHP domain [89551] (2 proteins)
   putative phosphoesterase domain; contains trinuclear metal-binding site; some similarity to the metallohydrolases of TIM-barrel fold

6. Protein Hypothetical protein YcdX [89552] (1 species)

7. Species Escherichia coli [TaxId:562] [89553] (3 PDB entries)
   Uniprot P75914

8. Domain d1m65a_: 1m65 A: [84847]
   structural genomics
   complexed with na, so4, zn

Details for d1m65a_

PDB Entry: 1m65, 1.57 Å

PDB Description: ycdx protein

PDB Compounds: (A:) Hypothetical protein ycdX

SCOPe Domain Sequences for d1m65a_:

Sequence, based on SEQRES records:

>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
ypvdlhmhtvasthaystlsdyiaqakqkgiklfaitdhgpdmedaphhwhfinmriwpr
vvdgvgilrgieaniknvdgeidcsgkmfdsldliiagfhepvfaphdkatntqamiati
asgnvhiishpgnpkyeidvkavaeaaakhqvaleinnssflhsrkgsedncrevaaavr
daggwvalgsdshtaftmgefeeclkildavdfpperilnvsprrllnflesrgmapiae
fadl

Sequence, based on observed residues (ATOM records):

>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
ypvdlhmhtvasthaystlsdyiaqakqkgiklfaitdhgpdmedaphhwhfinmriwpr
vvdgvgilrgieaniknvdgeidcsgkmfdsldliiagfhepvfaphdkatntqamiati
asgnvhiishpgnpkyeidvkavaeaaakhqvaleinnssncrevaaavrdaggwvalgs
dshtaftmgefeeclkildavdfpperilnvsprrllnflesrgmapiaefadl

Timeline for d1m65a_:

• d1m65a_ first appeared in SCOP 1.65
  
• d1m65a_ appears in SCOPe 2.07