Lineage for d1m65a_ (1m65 A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097504Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. 2097749Superfamily c.6.3: PHP domain-like [89550] (3 families) (S)
  5. 2097750Family c.6.3.1: PHP domain [89551] (2 protein domains)
    putative phosphoesterase domain; contains trinuclear metal-binding site; some similarity to the metallohydrolases of TIM-barrel fold
  6. 2097759Protein Hypothetical protein YcdX [89552] (1 species)
  7. 2097760Species Escherichia coli [TaxId:562] [89553] (3 PDB entries)
    Uniprot P75914
  8. 2097761Domain d1m65a_: 1m65 A: [84847]
    structural genomics
    complexed with na, so4, zn

Details for d1m65a_

PDB Entry: 1m65 (more details), 1.57 Å

PDB Description: ycdx protein
PDB Compounds: (A:) Hypothetical protein ycdX

SCOPe Domain Sequences for d1m65a_:

Sequence, based on SEQRES records: (download)

>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
ypvdlhmhtvasthaystlsdyiaqakqkgiklfaitdhgpdmedaphhwhfinmriwpr
vvdgvgilrgieaniknvdgeidcsgkmfdsldliiagfhepvfaphdkatntqamiati
asgnvhiishpgnpkyeidvkavaeaaakhqvaleinnssflhsrkgsedncrevaaavr
daggwvalgsdshtaftmgefeeclkildavdfpperilnvsprrllnflesrgmapiae
fadl

Sequence, based on observed residues (ATOM records): (download)

>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
ypvdlhmhtvasthaystlsdyiaqakqkgiklfaitdhgpdmedaphhwhfinmriwpr
vvdgvgilrgieaniknvdgeidcsgkmfdsldliiagfhepvfaphdkatntqamiati
asgnvhiishpgnpkyeidvkavaeaaakhqvaleinnssncrevaaavrdaggwvalgs
dshtaftmgefeeclkildavdfpperilnvsprrllnflesrgmapiaefadl

SCOPe Domain Coordinates for d1m65a_:

Click to download the PDB-style file with coordinates for d1m65a_.
(The format of our PDB-style files is described here.)

Timeline for d1m65a_: