SCOPe 2.08: Domain d1lvwd1: 1lvw D:1-292

Lineage for d1lvwd1 (1lvw D:1-292)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.6: glucose-1-phosphate thymidylyltransferase [53464] (4 proteins)
   automatically mapped to Pfam PF00483

6. Protein RmlA (RfbA) [53465] (5 species)

7. Species Methanobacterium thermoautotrophicum [TaxId:145262] [89759] (1 PDB entry)

8. Domain d1lvwd1: 1lvw D:1-292 [84726]
   Other proteins in same PDB: d1lvwa2, d1lvwb2, d1lvwc2, d1lvwd2
   complexed with cl, gol, so4, tyd

Details for d1lvwd1

PDB Entry: 1lvw, 1.7 Å

PDB Description: Crystal structure of glucose-1-phosphate thymidylyltransferase, RmlA, complex with dTDP

PDB Compounds: (D:) glucose-1-phosphate thymidylyltransferase

SCOPe Domain Sequences for d1lvwd1:

Sequence, based on SEQRES records:

>d1lvwd1 c.68.1.6 (D:1-292) RmlA (RfbA) {Methanobacterium thermoautotrophicum [TaxId: 145262]}
mkgivlaggsgtrlypitravskqllpiydkpmiyyplsvlmlagirdiliistprdlpl
yrdllgdgsqfgvrfsyrvqeeprgiadafivgkdfigdskvalvlgdnvfyghrfseil
rraasledgavifgyyvrdprpfgvvefdsegrvisieekpsrpksnyvvpglyfydnqv
veiarriepsdrgeleitsvneeylrmgklrvelmgrgmawldtgthdglleassfieti
qkrqgfyiacleeiaynngwitredvlemaeklektdygkylrdlaegnfhg

Sequence, based on observed residues (ATOM records):

>d1lvwd1 c.68.1.6 (D:1-292) RmlA (RfbA) {Methanobacterium thermoautotrophicum [TaxId: 145262]}
mkgivlaggtrlypitravskqllpiydkpmiyyplsvlmlagirdiliistprdlplyr
dllgdgsqfgvrfsyrvqeeprgiadafivgkdfigdskvalvlgdnvfyghrfseilrr
aasledgavifgyyvrdprpfgvvefdsegrvisieekpsrpksnyvvpglyfydnqvve
iarriepsdrgeleitsvneeylrmgklrvelmgrgmawldtgthdglleassfietiqk
rqgfyiacleeiaynngwitredvlemaeklektdygkylrdlaegnfhg

Timeline for d1lvwd1:

• d1lvwd1 first appeared in SCOP 1.65, called d1lvwd_
  
• d1lvwd1 appears in SCOPe 2.07