Lineage for d1lv5b1 (1lv5 B:297-468)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 397315Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 397627Superfamily c.55.3: Ribonuclease H-like [53098] (9 families) (S)
    consists of one domain of this fold
  5. 397834Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (7 proteins)
  6. 397868Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
    part of Klenow fragment, KF
  7. 397869Species Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId:1422] [53122] (24 PDB entries)
  8. 397892Domain d1lv5b1: 1lv5 B:297-468 [84721]
    Other proteins in same PDB: d1lv5a2, d1lv5b2
    complexed with dcp, mg, mn, so4; mutant

Details for d1lv5b1

PDB Entry: 1lv5 (more details), 1.95 Å

PDB Description: Crystal Structure of the Closed Conformation of Bacillus DNA Polymerase I Fragment Bound to DNA and dCTP

SCOP Domain Sequences for d1lv5b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1lv5b1 c.55.3.5 (B:297-468) Exonuclease domain of prokaryotic DNA polymerase {Bacillus stearothermophilus, newly identified strain as yet unnamed}
akmaftladrvteemladkaalvvevveenyhaapivgiavvnehgrfflrpetaladpq
fvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakm
kqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrn

SCOP Domain Coordinates for d1lv5b1:

Click to download the PDB-style file with coordinates for d1lv5b1.
(The format of our PDB-style files is described here.)

Timeline for d1lv5b1:

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Domains from same chain:
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d1lv5b2