SCOPe 2.08: Domain d1ltxr1: 1ltx R:2-444,R:558-614

Lineage for d1ltxr1 (1ltx R:2-444,R:558-614)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.3: FAD/NAD(P)-binding domain [51904] (1 superfamily)
   core: 3 layers, b/b/a; central parallel beta-sheet of 5 strands, order 32145; top antiparallel beta-sheet of 3 strands, meander

4. Superfamily c.3.1: FAD/NAD(P)-binding domain [51905] (9 families)

5. Family c.3.1.3: GDI-like N domain [51931] (3 proteins)
   Similar to FAD-linked reductases in both domains but does not bind FAD

6. Protein Rab escort protein 1 [89546] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [89547] (3 PDB entries)
   Uniprot P37727

8. Domain d1ltxr1: 1ltx R:2-444,R:558-614 [84715]
   Other proteins in same PDB: d1ltxa1, d1ltxa2, d1ltxa3, d1ltxb_, d1ltxr2
   complexed with cl, far, zn
   has additional insertions and/or extensions that are not grouped together

Details for d1ltxr1

PDB Entry: 1ltx, 2.7 Å

PDB Description: structure of rab escort protein-1 in complex with rab geranylgeranyl transferase and isoprenoid

PDB Compounds: (R:) Rab Escort Protein 1

SCOPe Domain Sequences for d1ltxr1:

Sequence, based on SEQRES records:

>d1ltxr1 c.3.1.3 (R:2-444,R:558-614) Rab escort protein 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
adnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlke
yqenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdlhkdveeagalqkn
hasvtsaqsaeaaeaaetsclptaveplsmgsceipaeqsqcpgpesspevndaeatgkk
ensdakssteepsenvpkvqdntetpkknritysqiikegrrfnidlvskllysrgllid
lliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmkfltfcve
yeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglkatkkflqc
lgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkckavidqfg
qriiskhfiiedsylsentcsrvXsrdcyndlpsnvyvcsgpdsglgndnavkqaetlfq
qicpnedfcpappnpedivld

Sequence, based on observed residues (ATOM records):

>d1ltxr1 c.3.1.3 (R:2-444,R:558-614) Rab escort protein 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
adnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlke
yqentensmwqeqileneeaiplsskdktiqhvevfcyasqdknritysqiikegrrfni
dlvskllysrgllidlliksnvsryaefknitrilafregtveqvpcsradvfnskqltm
vekrmlmkfltfcveyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtstsct
vdglkatkkflqclgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdk
esrkckavidqfgqriiskhfiiedsylsentcsrvXsrdcyndlpsnvyvcsgpdsglg
ndnavkqaetlfqqicpnedfpedivld

Timeline for d1ltxr1:

• d1ltxr1 first appeared in SCOP 1.65
  
• d1ltxr1 appears in SCOPe 2.07