SCOPe 2.08: Domain d1ltxb_: 1ltx B:

Lineage for d1ltxb_ (1ltx B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (5 families)

5. Family a.102.4.3: Protein prenyltransferases [48246] (3 proteins)

6. Protein Rab geranylgeranyltransferase, beta subunit [48249] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [48250] (21 PDB entries)

8. Domain d1ltxb_: 1ltx B: [84714]
   Other proteins in same PDB: d1ltxa1, d1ltxa2, d1ltxa3, d1ltxr1, d1ltxr2
   complexed with cl, far, zn

Details for d1ltxb_

PDB Entry: 1ltx, 2.7 Å

PDB Description: structure of rab escort protein-1 in complex with rab geranylgeranyl transferase and isoprenoid

PDB Compounds: (B:) rab geranylgeranyltransferase beta subunit

SCOPe Domain Sequences for d1ltxb_:

Sequence, based on SEQRES records:

>d1ltxb_ a.102.4.3 (B:) Rab geranylgeranyltransferase, beta subunit {Norway rat (Rattus norvegicus) [TaxId: 10116]}
kdvtiksdapdtlllekhadyiasygskkddyeycmseylrmsgvywgltvmdlmgqlhr
mnkeeilvfikscqhecggvsasighdphllytlsavqiltlydsihvinvdkvvayvqs
lqkedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcrp
gseshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcyswwv
laslkiigrlhwidreklrsfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgeeq
ikpvspvfcmpeevlqrvnvqpelvs

Sequence, based on observed residues (ATOM records):

>d1ltxb_ a.102.4.3 (B:) Rab geranylgeranyltransferase, beta subunit {Norway rat (Rattus norvegicus) [TaxId: 10116]}
kdvtiksdpdtlllekhadyiasygscmseylrmsgvywgltvmdlmgqlhrmnkeeilv
fikscqhecggvsasighdphllytlsavqiltlydsihvinvdkvvayvqslqkedgsf
agdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcrpgseshagq
iycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcyswwvlaslkiig
rlhwidreklrsfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgeeqikpvspvf
cmpeevlqrvnvqpelvs

Timeline for d1ltxb_:

• d1ltxb_ first appeared in SCOP 1.65
  
• d1ltxb_ appears in SCOPe 2.07