SCOPe 2.04: Domain d1ltxa3: 1ltx A:444-567

Lineage for d1ltxa3 (1ltx A:444-567)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.2: L domain-like [52058] (9 families)
   less regular structure consisting of variable repeats

5. Family c.10.2.2: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain [52062] (1 protein)
   this is a repeat family; one repeat unit is 1dce A:472-495 found in domain

6. Protein Rab geranylgeranyltransferase alpha-subunit, C-terminal domain [52063] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [52064] (2 PDB entries)

8. Domain d1ltxa3: 1ltx A:444-567 [84713]
   Other proteins in same PDB: d1ltxa1, d1ltxa2, d1ltxb_, d1ltxr1, d1ltxr2
   complexed with cl, far, zn

Details for d1ltxa3

PDB Entry: 1ltx, 2.7 Å

PDB Description: structure of rab escort protein-1 in complex with rab geranylgeranyl transferase and isoprenoid

PDB Compounds: (A:) rab geranylgeranyltransferase alpha subunit

SCOPe Domain Sequences for d1ltxa3:

Sequence; same for both SEQRES and ATOM records:

>d1ltxa3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
rvlhlahkdltvlchleqlllvthldlshnrlralppalaalrclevlqasdnalenvdg
vanlprlqelllcnnrlqqsaaiqplvscprlvllnlqgnslcqeegiqerlaemlpsvs
silt

Timeline for d1ltxa3:

• d1ltxa3 first appeared in SCOP 1.65
  
• d1ltxa3 appears in SCOPe 2.03
  
• d1ltxa3 appears in SCOPe 2.05
  
• d1ltxa3 appears in the current release, SCOPe 2.08