SCOPe 2.04: Domain d1ltxa1: 1ltx A:24-241,A:351-443

Lineage for d1ltxa1 (1ltx A:24-241,A:351-443)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.6: Protein prenylyltransferase [48439] (1 family)

5. Family a.118.6.1: Protein prenylyltransferase [48440] (3 proteins)

6. Protein Rab geranylgeranyltransferase alpha-subunit, N-terminal domain [48443] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [48444] (2 PDB entries)

8. Domain d1ltxa1: 1ltx A:24-241,A:351-443 [84711]
   Other proteins in same PDB: d1ltxa2, d1ltxa3, d1ltxb_, d1ltxr1, d1ltxr2
   complexed with cl, far, zn

Details for d1ltxa1

PDB Entry: 1ltx, 2.7 Å

PDB Description: structure of rab escort protein-1 in complex with rab geranylgeranyl transferase and isoprenoid

PDB Compounds: (A:) rab geranylgeranyltransferase alpha subunit

SCOPe Domain Sequences for d1ltxa1:

Sequence, based on SEQRES records:

>d1ltxa1 a.118.6.1 (A:24-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klklyqsatqavfqkrqageldesvleltsqilganpdfatlwncrrevlqhletekspe
esaalvkaelgflesclrvnpksygtwhhrcwllsrlpepnwarelelcarfleadernf
hcwdyrrfvaaqaavapaeelaftdslitrnfsnysswhyrscllpqlhpqpdsgpqgrl
penvllkelelvqnafftdpndqsawfyhrwllgraepXlfrcelsvekstvlqselesc
kelqelepenkwclltiillmraldpllyeketlqyfstlkavdpmraaylddlrskfll
ensvlkmeyadv

Sequence, based on observed residues (ATOM records):

>d1ltxa1 a.118.6.1 (A:24-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klklyqsatqavfqkrqageldesvleltsqilganpdfatlwncrrevlqhletekspe
esaalvkaelgflesclrvnpksygtwhhrcwllsrlpepnwarelelcarfleadernf
hcwdyrrfvaaqaavapaeelaftdslitrnfsnysswhyrscllpqlhpqgrlpenvll
kelelvqnafftdpndqsawfyhrwllgraepXlfrcelsvekstvlqselesckelqel
epenkwclltiillmraldpllyeketlqyfstlkavdpmraaylddlrskfllensvlk
meyadv

Timeline for d1ltxa1:

• d1ltxa1 first appeared in SCOP 1.65
  
• d1ltxa1 appears in SCOPe 2.03
  
• d1ltxa1 appears in SCOPe 2.05
  
• d1ltxa1 appears in the current release, SCOPe 2.08