SCOPe 2.06: Domain d1lmea1: 1lme A:1-145

Lineage for d1lmea1 (1lme A:1-145)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.167: Peptide deformylase [56419] (1 superfamily)
   alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix

4. Superfamily d.167.1: Peptide deformylase [56420] (2 families)
   nickel-dependent enzyme

5. Family d.167.1.1: Peptide deformylase [56421] (2 proteins)
   automatically mapped to Pfam PF01327

6. Protein Peptide deformylase [56422] (11 species)

7. Species Thermotoga maritima [TaxId:2336] [90058] (1 PDB entry)

8. Domain d1lmea1: 1lme A:1-145 [84629]
   Other proteins in same PDB: d1lmea2, d1lmeb2

Details for d1lmea1

PDB Entry: 1lme, 2.2 Å

PDB Description: Crystal Structure of Peptide Deformylase from Thermotoga maritima

PDB Compounds: (A:) Peptide deformylase

SCOPe Domain Sequences for d1lmea1:

Sequence; same for both SEQRES and ATOM records:

>d1lmea1 d.167.1.1 (A:1-145) Peptide deformylase {Thermotoga maritima [TaxId: 2336]}
myrirvfgdpvlrkrakpvtkfdenlkktiermietmyhydgvglaapqvgisqrffvmd
vgngpvavinpeileidpetevaeegclsfpeifveierskrikvkyqntrgeyveeele
gyaarvfqhefdhlngvliidrisp

Timeline for d1lmea1:

• d1lmea1 first appeared in SCOP 1.65, called d1lmea_
  
• d1lmea1 was called d1lmea_ in SCOPe 2.05
  
• d1lmea1 appears in SCOPe 2.07
  
• d1lmea1 appears in the current release, SCOPe 2.08