Lineage for d1l3sa1 (1l3s A:297-468)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 397315Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 397627Superfamily c.55.3: Ribonuclease H-like [53098] (9 families) (S)
    consists of one domain of this fold
  5. 397834Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (7 proteins)
  6. 397868Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
    part of Klenow fragment, KF
  7. 397869Species Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId:1422] [53122] (24 PDB entries)
  8. 397871Domain d1l3sa1: 1l3s A:297-468 [84521]
    Other proteins in same PDB: d1l3sa2
    complexed with mg, so4, suc

Details for d1l3sa1

PDB Entry: 1l3s (more details), 1.7 Å

PDB Description: Crystal Structure of Bacillus DNA Polymerase I Fragment complexed to 9 base pairs of duplex DNA.

SCOP Domain Sequences for d1l3sa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1l3sa1 c.55.3.5 (A:297-468) Exonuclease domain of prokaryotic DNA polymerase {Bacillus stearothermophilus, newly identified strain as yet unnamed}
akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpq
fvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakm
kqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrn

SCOP Domain Coordinates for d1l3sa1:

Click to download the PDB-style file with coordinates for d1l3sa1.
(The format of our PDB-style files is described here.)

Timeline for d1l3sa1:

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Domains from same chain:
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d1l3sa2