Lineage for d1k1yb2 (1k1y B:385-659)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 460730Fold b.30: Supersandwich [49993] (3 superfamilies)
    sandwich; 18 strands in 2 sheets
  4. 460800Superfamily b.30.5: Galactose mutarotase-like [74650] (10 families) (S)
    probable carbohydrate-binding domain in enzymes acting on sugars
  5. 461069Family b.30.5.8: 4-alpha-glucanotransferase, C-terminal domain [89286] (1 protein)
    family 57 glycoside hydrolase; overall domain organization is similar to that of the alpha-mannosidase family
  6. 461070Protein 4-alpha-glucanotransferase, C-terminal domain [89287] (1 species)
  7. 461071Species Archaeon Thermococcus litoralis [TaxId:2265] [89288] (3 PDB entries)
  8. 461075Domain d1k1yb2: 1k1y B:385-659 [84289]
    Other proteins in same PDB: d1k1ya1, d1k1ya3, d1k1yb1, d1k1yb3

Details for d1k1yb2

PDB Entry: 1k1y (more details), 2.4 Å

PDB Description: crystal structure of thermococcus litoralis 4-alpha-glucanotransferase complexed with acarbose

SCOP Domain Sequences for d1k1yb2:

Sequence, based on SEQRES records: (download)

>d1k1yb2 b.30.5.8 (B:385-659) 4-alpha-glucanotransferase, C-terminal domain {Archaeon Thermococcus litoralis}
kpenkildvdfdgraeimvendgfiatikphyggsifelsskrkavnyndvlprrwehyh
evpeatkpekeseegiasihelgkqipeeirrelaydwqlrailqdhfikpeetldnyrl
vkyhelgdfvnqpyeyemiengvklwreggvyaeekiparvekkieltedgfiakyrvll
ekpykalfgveinlavhsvmekpeefeakefevndpygigkvrieldkaakvwkfpiktl
sqseagwdfiqqgvsytmlfpiekeleftvrfrel

Sequence, based on observed residues (ATOM records): (download)

>d1k1yb2 b.30.5.8 (B:385-659) 4-alpha-glucanotransferase, C-terminal domain {Archaeon Thermococcus litoralis}
kpenkildvdfdgraeimvendgfiatikphyggsifelsskrkavnyndvlprrwehyh
evqipeeirrelaydwqlrailqdhfikpeetldnyrlvkyhelgdfvnqpyeyemieng
vklwreggvyaeekiparvekkieltedgfiakyrvllekpykalfgveinlavhsvmek
peefeakefevndpygigkvrieldkaakvwkfpiktlsqseagwdfiqqgvsytmlfpi
ekeleftvrfrel

SCOP Domain Coordinates for d1k1yb2:

Click to download the PDB-style file with coordinates for d1k1yb2.
(The format of our PDB-style files is described here.)

Timeline for d1k1yb2: