SCOP 1.73: Domain d1j2bb2: 1j2b B:7-360

Lineage for d1j2bb2 (1j2b B:7-360)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Archaeosine tRNA-guanine transglycosylase, N-terminal domain [75096] (1 species)

7. Species Archaeon Pyrococcus horikoshii [TaxId:53953] [75097] (4 PDB entries)

8. Domain d1j2bb2: 1j2b B:7-360 [84014]
   Other proteins in same PDB: d1j2ba1, d1j2ba3, d1j2bb1, d1j2bb3
   complexed with mg, zn

Details for d1j2bb2

PDB Entry: 1j2b, 3.3 Å

PDB Description: Crystal Structure Of Archaeosine tRNA-Guanine Transglycosylase Complexed With lambda-form tRNA(Val)

PDB Compounds: (B:) archaeosine tRNA-guanine transglycosylase

SCOP Domain Sequences for d1j2bb2:

Sequence; same for both SEQRES and ATOM records:

>d1j2bb2 c.1.20.1 (B:7-360) Archaeosine tRNA-guanine transglycosylase, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
mlkfeikardgagrigklevngkkietpaimpvvnpkqmvvepkelekmgfeiiitnsyi
iykdeelrrkalelgihrmldyngiievdsgsfqlmkygsievsnreiiefqhrigvdig
tfldiptppdapreqavkeleitlsrareaeeikeipmnatiqgstytdlrryaarrlss
mnfeihpiggvvpllesyrfrdvvdivisskmalrpdrpvhlfgaghpivfalavamgvd
lfdsasyalyakddrymtpegtkrldeldyfpcscpvcskytpqelrempkeertrllal
hnlwvikeeikrvkqaikegelwrlvderarshpklysaykrllehytfleefe

Timeline for d1j2bb2:

• d1j2bb2 first appeared in SCOP 1.65
  
• d1j2bb2 appears in SCOP 1.71
  
• d1j2bb2 appears in SCOP 1.75
  
• d1j2bb2 appears in the current release, SCOPe 2.08