SCOP 1.65: Domain d1j1na_: 1j1n A:

Lineage for d1j1na_ (1j1n A:)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.1: Phosphate binding protein-like [53851] (21 proteins)

6. Protein Alginate-binding periplasmic protein AlgQ2 [69624] (1 species)

7. Species Sphingomonas sp. [69625] (2 PDB entries)

8. Domain d1j1na_: 1j1n A: [83978]

Details for d1j1na_

PDB Entry: 1j1n, 1.6 Å

PDB Description: structure analysis of algq2, a macromolecule(alginate)-binding periplasmic protein of sphingomonas sp. a1., complexed with an alginate tetrasaccharide

SCOP Domain Sequences for d1j1na_:

Sequence; same for both SEQRES and ATOM records:

>d1j1na_ c.94.1.1 (A:) Alginate-binding periplasmic protein AlgQ2 {Sphingomonas sp.}
keatwvtdkpltlkihmhfrdkwvwdenwpvakesfrltnvklqsvankaatnsqeqfnl
mmasgdlpdvvggdnlkdkfiqygqegafvplnklidqyaphikaffkshpeveraikap
dgniyfipyvpdgvvargyfiredwlkklnlkppqnidelytvlkafkekdpngngkade
vpfidrhpdevfrlvnfwgarssgsdnymdfyidngrvkhpwaetafrdgmkhvaqwyke
glidkeiftrkakareqmfggnlggfthdwfastmtfneglaktvpgfklipiapptnsk
gqrweedsrqkvrpdgwaitvknknpvetikffdfyfsrpgrdisnfgvpgvtydikngk
avfkdsvlkspqpvnnqlydmgaqipigfwqdydyerqwttpeaqagidmyvkgkyvmpg
fegvnmtreeraiydkywadvrtymyemgqawvmgtkdvdktwdeyqrqlklrglyqvlq
mmqqaydrqykn

Timeline for d1j1na_:

• d1j1na_ is new in SCOP 1.65
  
• d1j1na_ appears in SCOP 1.67
  
• d1j1na_ appears in the current release, SCOPe 2.08