SCOP 1.65: Domain d1hjxb1: 1hjx B:22-260,B:329-383

Lineage for d1hjxb1 (1hjx B:22-260,B:329-383)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (9 families)

5. Family c.1.8.5: Type II chitinase [51534] (14 proteins)
   glycosylase family 18

6. Protein Chitinase-3 like protein 1 (GP-39, YKL-40) [89482] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [89483] (3 PDB entries)

8. Domain d1hjxb1: 1hjx B:22-260,B:329-383 [83514]
   Other proteins in same PDB: d1hjxa2, d1hjxb2, d1hjxc2, d1hjxd2

Details for d1hjxb1

PDB Entry: 1hjx, 1.85 Å

PDB Description: ligand-induced signalling and conformational change of the 39 kd glycoprotein from human articular chondrocytes

SCOP Domain Sequences for d1hjxb1:

Sequence; same for both SEQRES and ATOM records:

>d1hjxb1 c.1.8.5 (B:22-260,B:329-383) Chitinase-3 like protein 1 (GP-39, YKL-40) {Human (Homo sapiens)}
yklvcyytswsqyregdgscfpdaldrflcthiiysfanisndhidtwewndvtlygmln
tlknrnpnlktllsvggwnfgsqrfskiasntqsrrtfiksvppflrthgfdgldlawly
pgrrdkqhfttlikemkaefikeaqpgkkqlllsaalsagkvtidssydiakisqhldfi
simtydfhgawrgttghhsplfrgqedaspdrfsntdyavgymlrlgapasklvmgiptX
ddqesvkskvqylkdrqlagamvwaldlddfqgsfcgqdlrfpltnaikdalaat

Timeline for d1hjxb1:

• d1hjxb1 is new in SCOP 1.65
  
• d1hjxb1 appears in SCOP 1.67
  
• d1hjxb1 appears in the current release, SCOPe 2.08