Lineage for d1gyna_ (1gyn A:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1815292Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1821671Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 1822456Family c.1.10.2: Class II FBP aldolase [51591] (3 proteins)
    metal-dependent
    automatically mapped to Pfam PF01116
  6. 1822457Protein Fructose-bisphosphate aldolase (FBP aldolase) [51592] (2 species)
  7. 1822458Species Escherichia coli [TaxId:562] [51593] (4 PDB entries)
  8. 1822461Domain d1gyna_: 1gyn A: [83385]
    complexed with cd

Details for d1gyna_

PDB Entry: 1gyn (more details), 2 Å

PDB Description: class ii fructose 1,6-bisphosphate aldolase with cadmium (not zinc) in the active site
PDB Compounds: (A:) fructose-bisphosphate aldolase II

SCOPe Domain Sequences for d1gyna_:

Sequence, based on SEQRES records: (download)

>d1gyna_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]}
skifdfvkpgvitgddvqkvfqvakennfalpavncvgtdsinavletaakvkapvivqf
snggasfiagkgvksdvpqgaailgaisgahhvhqmaehygvpvilhtdhcakkllpwid
glldagekhfaatgkplfsshmidlseeslqenieicskylermskigmtleielgctgg
eedgvdnshmdasalytqpedvdyaytelskisprftiaasfgnvhgvykpgnvvltpti
lrdsqeyvskkhnlphnslnfvfhggsgstaqeikdsvsygvvkmnidtdtqwatwegvl
nyykaneaylqgqlgnpkgedqpnkkyydprvwlragqtsmiarlekafqelnaidvl

Sequence, based on observed residues (ATOM records): (download)

>d1gyna_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]}
skifdfvkpgvitgddvqkvfqvakennfalpavncvgtdsinavletaakvkapvivqf
snggasfiagkgvksdvpqgaailgaisgahhvhqmaehygvpvilhtdhcakkllpwid
glldagekhfaatgkplfsshmidlseeslqenieicskylermskigmtleielgalyt
qpedvdyaytelskisprftiaasfgnvvvltptilrdsqeyvskkhnlphnslnfvfhg
gsgstaqeikdsvsygvvkmnidtdtqwatwegvlnyykaneaylqgqlgnpkgedqpnk
kyydprvwlragqtsmiarlekafqelnaidvl

SCOPe Domain Coordinates for d1gyna_:

Click to download the PDB-style file with coordinates for d1gyna_.
(The format of our PDB-style files is described here.)

Timeline for d1gyna_: