SCOP 1.65: Domain d1gqyb2: 1gqy B:322-474

Lineage for d1gqyb2 (1gqy B:322-474)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.59: MurD-like peptide ligases, peptide-binding domain [53243] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest

4. Superfamily c.59.1: MurD-like peptide ligases, peptide-binding domain [53244] (2 families)

5. Family c.59.1.1: MurCDEF C-terminal domain [53245] (4 proteins)

6. Protein UDP-N-acetylmuramate-alanine ligase MurC [82452] (2 species)

7. Species Haemophilus influenzae [TaxId:727] [89727] (4 PDB entries)

8. Domain d1gqyb2: 1gqy B:322-474 [83309]
   Other proteins in same PDB: d1gqya1, d1gqya3, d1gqyb1, d1gqyb3
   complexed with acp, mg

Details for d1gqyb2

PDB Entry: 1gqy, 1.8 Å

PDB Description: murc - crystal structure of the enzyme from haemophilus influenzae complexed with amppcp

SCOP Domain Sequences for d1gqyb2:

Sequence; same for both SEQRES and ATOM records:

>d1gqyb2 c.59.1.1 (B:322-474) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae}
gagrrfdqlgefirpngkvrlvddyghhptevgvtikaaregwgdkrivmifqphrysrt
rdlfddfvqvlsqvdalimldvyaageapivgadskslcrsirnlgkvdpilvsdtsqlg
dvldqiiqdgdlilaqgagsvskisrglaeswk

Timeline for d1gqyb2:

• d1gqyb2 is new in SCOP 1.65
  
• d1gqyb2 appears in SCOP 1.67
  
• d1gqyb2 appears in the current release, SCOPe 2.08