Lineage for d1rmu.1 (1rmu 4:,2:)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 382736Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 382819Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (8 families) (S)
  5. 382820Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (9 proteins)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 382934Protein Rhinovirus coat proteins [49670] (5 species)
  7. 382983Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] [49671] (30 PDB entries)
  8. 383035Domain d1rmu.1: 1rmu 4:,2: [83113]

Details for d1rmu.1

PDB Entry: 1rmu (more details), 3 Å

PDB Description: three-dimensional structures of drug-resistant mutants of human rhinovirus 14

SCOP Domain Sequences for d1rmu.1:

Sequence; same for both SEQRES and ATOM records: (download)

>g1rmu.1 b.121.4.1 (4:,2:) Rhinovirus coat proteins {Human rhinovirus B 14 (HRV-14)}
inyykdaastssagqslsmdpskftepvkdlmlkgapalnXgysdrvqqitlgnstittq
eaanavvcyaewpeylpdvdasdvnktskpdtsvcrfytldsktwttgskgwcwklpdal
kdmgvfgqnmffhslgrsgytvhvqcnatkfhsgcllvvvipehqlasheggnvsvkytf
thpgergidlssanevggpvkdvlynmngtllgnllifphqfinlrtnntativipyins
vpidsmtrhnnvslmvipiapltvptgatpslpitvtiapmctefsgirsksivpq

SCOP Domain Coordinates for d1rmu.1:

Click to download the PDB-style file with coordinates for d1rmu.1.
(The format of our PDB-style files is described here.)

Timeline for d1rmu.1: