Lineage for d1pvc.1 (1pvc 4:,2:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2430785Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2431062Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2431063Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2431121Protein Poliovirus coat proteins [49666] (3 species)
  7. 2431162Species Poliovirus type 3, strain Sabin [TaxId:12086] [49669] (7 PDB entries)
  8. 2431163Domain d1pvc.1: 1pvc 4:,2: [83104]
    complexed with myr, sph

Details for d1pvc.1

PDB Entry: 1pvc (more details), 2.4 Å

PDB Description: refinement of the sabin strain of type 3 poliovirus at 2.4 angstroms and the crystal structures of its variants at 2.9 angstroms resolution
PDB Compounds: (2:) poliovirus type 3, sabin strain, (4:) poliovirus type 3, sabin strain

SCOPe Domain Sequences for d1pvc.1:

Sequence, based on SEQRES records: (download)

>g1pvc.1 b.121.4.1 (4:,2:) Poliovirus coat proteins {Poliovirus type 3, strain Sabin [TaxId: 12086]}

Sequence, based on observed residues (ATOM records): (download)

>g1pvc.1 b.121.4.1 (4:,2:) Poliovirus coat proteins {Poliovirus type 3, strain Sabin [TaxId: 12086]}

SCOPe Domain Coordinates for d1pvc.1:

Click to download the PDB-style file with coordinates for d1pvc.1.
(The format of our PDB-style files is described here.)

Timeline for d1pvc.1: